CRA Trust Accounts Examination Help for Canadian Businesses

A trust accounts examination is the CRA's review of the payroll deductions you withheld and the GST/HST you collected. Brookside CPA organises the records, reconciles the differences, and deals with the examination officer where you authorise us to.

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A CRA trust accounts examination is a review of funds your business holds in trust for the government: payroll deductions withheld from employees and GST/HST collected from customers. It is narrower than a tax audit, covering only your payroll and GST/HST reporting obligations, though findings can lead to an audit referral. If you have been contacted, verify the officer's identity, note every deadline, and start reconciling your payroll and GST/HST records to your returns.

Start here

What Is a CRA Trust Accounts Examination?

When you withhold income tax, Canada Pension Plan (CPP) contributions and Employment Insurance (EI) premiums from an employee's pay, that money is not yours. Neither is the Goods and Services Tax or Harmonized Sales Tax (GST/HST) you charge a customer. Both are collected on the government's behalf and held in trust until you remit them. That is where the name comes from.

The Canada Revenue Agency (CRA) describes a trust accounts examination as the examination of accounts of funds held in trust for the government, done to confirm that the information on your information returns is correct and complete and that you have met your withholding and reporting obligations.

Two points people commonly get wrong. First, the examination looks at reporting, not only at unpaid balances. You can be examined with nothing outstanding. Second, the employer's own share of CPP and EI is reviewed alongside the amounts withheld from employees.

The examination is narrower than a tax audit. The CRA states that its focus differs from a tax audit because it relates only to your payroll and GST/HST reporting obligations. It does not review your corporate income tax return as a whole.
A note for Quebec businesses. Revenu Québec administers certain payroll and sales tax matters that the CRA administers elsewhere in Canada, including QPP contributions, Québec income tax, QPIP premiums and QST. If your employees work in Quebec, the process and the agency involved may differ from what is described here.
Scope

What Does CRA Review?

An examination can cover payroll, GST/HST, or both at the same time. The CRA states the purpose is to maintain the integrity of the tax system in respect of reporting employment income and taxable benefits, withholding and remitting payroll amounts, GST/HST collecting, remitting and filing, and the proper characterisation of workers as employee or self-employed.

Payroll examination

Everything connected to what you paid people and what you withheld from it.

  • Employment income, including overtime, bonuses and commissions
  • CPP contributions and EI premiums withheld
  • Income tax deductions
  • The employer's share of CPP and EI
  • Taxable benefits, including vehicles and allowances
  • T4 and T4A slips and summaries
  • Remittance amounts, frequency and due dates
  • Whether workers are employees or self-employed

GST/HST examination

Everything connected to the sales tax you charged and the credits you claimed.

  • GST/HST collected or collectible on taxable sales
  • Returns filed, and any periods still outstanding
  • Input tax credits claimed
  • Sales invoices and purchase invoices supporting both
  • Sales records and point-of-sale reports
  • Reconciliations between the returns and the ledger
  • Remittance and filing history
  • Whether tax should have been charged on a sale at all
Not the same thing

Trust Accounts Examination vs. CRA Audit

These are two different CRA activities and people confuse them constantly. An examination is narrower, but it is not automatically harmless: findings can still lead to assessments, penalties, interest, corrections or a referral for a broader review.

 Trust accounts examinationCRA audit
ScopePayroll and GST/HST reporting obligations onlyA broader examination of your books and records
Records examinedPayroll journals, T4 and T4A returns, remittances, GST/HST returns, sales and purchase invoices, supporting ledgersWhatever the audit scope requires, which can include the full general ledger and the corporate return
Main objectiveConfirming information returns are correct and complete, and that withholding and reporting obligations were metVerifying the amounts reported on a tax return and assessing any difference
Typical issuesLate or missing remittances, unreported taxable benefits, T4 and remittance mismatches, worker classification, unsupported input tax creditsDenied expenses, unreported income, shareholder benefits, valuation and timing issues
Possible outcomesNo material change, amended T4 or T4A slips, statements of account, assessments, penalties and interestReassessment of the return, penalties and interest, and in some cases further review
Can it become the other?Yes. The CRA states that concerns raised during an examination can result in a referral for an auditAn audit does not become an examination, though it may lead to other CRA reviews

Trust accounts examination

Scope
Payroll and GST/HST reporting obligations only
Records examined
Payroll journals, T4 and T4A returns, remittances, GST/HST returns, sales and purchase invoices
Main objective
Confirming information returns are correct and complete, and that withholding and reporting obligations were met
Typical issues
Late remittances, unreported taxable benefits, T4 mismatches, worker classification, unsupported input tax credits
Possible outcomes
No material change, amended slips, statements of account, assessments, penalties and interest
Can it become an audit?
Yes, by referral, if the examination raises concerns

CRA audit

Scope
A broader examination of your books and records
Records examined
Whatever the audit scope requires, including the general ledger and the corporate return
Main objective
Verifying amounts reported on a tax return and assessing any difference
Typical issues
Denied expenses, unreported income, shareholder benefits, valuation and timing
Possible outcomes
Reassessment, penalties and interest, sometimes further review
Being selected does not mean the CRA has decided you did something wrong. Selection can follow from routine compliance activity or from information picked up elsewhere. What matters is how you respond. If your file is a GST/HST audit rather than an examination, start here.
Selection

Why Was Your Business Selected?

The CRA publishes a list of factors that may lead it to review an account. These are its stated factors, not a complete or guaranteed list, and none of them proves that anything is wrong.

1

Late or missed payroll remittancesYou remit late, or a payroll payment was not made.

2

T4 or T4A returns filed late or not at allInformation returns are outstanding or were filed after the deadline.

3

GST/HST returns filed late or not at allThe same issue on the sales tax side.

4

An unanswered PD4R noticeThe CRA sent a tax deduction, CPP and EI discrepancy notice and received no response.

5

A CPP/EI ruling changed your obligationsA ruling confirmed a worker's status and your reporting or withholding needs to change.

6

An employee disputed what you paid themA worker disagrees about amounts paid or the period they worked.

7

A shareholder changed how income was reportedFor example, a shift from salary to dividends after the fact.

8

A request from Employment and Social Development CanadaESDC asked the CRA to confirm earnings reported by a worker claiming EI.

9

The business stopped operatingIncluding a temporary stop, a receivership or a bankruptcy.

Treat these as risk indicators rather than a formula. The CRA does not publish how it weighs them, and routine compliance activity accounts for a share of examinations on its own.
The process

How the Examination Process Works

The CRA describes four stages and publishes indicative timings for each. Individual files can take longer, and these are the agency's general expectations rather than guarantees.

1
Day 1

CRA makes contact

The CRA contacts you or your authorised representative to say the program account is being reviewed by a Trust Accounts Examination Officer.

  • Verify the officer's identity first. Ask for their name, phone number and office location, and call the CRA back independently if unsure.
  • In person, they must show an RC121A authorisation card with name, photo and badge number.
  • Note the program account, the purpose, the periods and the next deadline.
  • The CRA will not contact you by email for this.
2
Usually up to 15 days

Preparing

You are told whether the examination will be in person or online, and exactly which books and records to provide.

  • Once requested, you are legally required to provide the documents.
  • Scope is set by the issues the CRA identified, so send what was asked for rather than everything.
  • Reconcile the payroll journal to the T4 return and to the remittances first.
  • Reconcile GST/HST returns to the ledger and to the sales records.
3
Usually within 30 days

Examination

The officer reviews the records, either at your place of business or electronically at a CRA office.

  • They sample gross pay, allowances and benefits against the payroll journal, then reconcile the year to the T4 summary.
  • If the CRA borrows physical records, they complete a T2213 receipt listing what was taken.
  • If you cannot meet the date, call the officer and ask for more time. They decide whether to grant it.
  • If records are not provided by the deadline, the CRA can adjust the account on the information it already holds.
4
Same day, or 15 days by mail

Results

The officer discusses the outcome with you in person or by phone, and issues statements of account.

  • PD83-1 for a payroll examination, GST501 for a GST/HST examination, whichever applies.
  • Amended or additional T4 or T4A slips where income or benefits were not reported correctly.
  • PD86 Statement of Discrepancies where CPP or EI was not deducted properly.
  • A notice of assessment arrives separately if an assessment is required.
The CRA states the full process is generally completed within 60 days. Statements of account go to the legal entity rather than to your representative, so ask us to be copied if you want to see them at the same time you do. If you disagree with an assessment, a formal objection or appeal route is available.
Documents

What Records May Be Requested?

The CRA publishes the categories it may ask for. What you actually receive depends on the accounts, periods and issues under examination. Follow the specific request rather than sending every record you have.

General records

  • Accounts receivable and payable ledgers and journals
  • Bank statements, cancelled cheques, cheque register
  • Cash disbursements and cash receipts journals, including petty cash
  • Current balance sheet and income statement
  • General ledger and general journal
  • Corporate documents: minutes, shareholders, directors, share holdings
  • Prior CRA correspondence

Payroll records

  • Salary and wage journal, manual or electronic
  • T4 and T4A slips and summaries
  • Source deduction calculations and remittance confirmations
  • Taxable benefit calculations, including automobile and allowances
  • Employment contracts and contractor agreements
  • Worker details, duties, schedule, and how they are paid
  • Forms TD1, TD1-IN, TD1X, TD3F and CPT30 where they apply

GST/HST records

  • GST/HST returns, including any outstanding periods
  • Sales reports and point-of-sale reports
  • Sales invoices and purchase invoices
  • Input tax credit documentation
  • Reconciliations between returns and the ledger
  • Bank statements supporting reported sales
  • Summaries for the periods under review
The CRA may also ask your accountant or bookkeeper directly for input about the records and what was reported on your information returns. Records generally need to be kept organised and available on request. This is one of the few situations where having someone who already knows your file saves days rather than hours.
Perspective

How Serious Is a Trust Accounts Examination?

It depends entirely on what the records show. Some examinations close with no material change. Others surface issues that carry real cost. Here is an honest read of where a file usually sits.

Lower concern
  • Records are complete and organised
  • Returns reconcile to the books
  • Differences exist but are explainable
  • No material balance appears outstanding
  • Remittances were made on time
Moderate concern
  • Some documentation is missing
  • Remittances were made late
  • Taxable benefits were not reported correctly
  • Payroll records and T4s do not reconcile
  • Input tax credits lack complete support
Higher concern
  • Significant unpaid payroll or GST/HST amounts
  • Repeated filing or remittance failures
  • Material employee versus contractor issues
  • Substantial unreported taxable benefits
  • Books and records are incomplete
  • The corporation may be unable to pay an assessment
  • Potential personal exposure for directors
  • The examination may expand into a broader audit

What can follow, depending on the findings. Adjustments or assessments. Penalties and interest. Amended T4 or T4A slips that you then have to send to the workers concerned. Collection action if assessed amounts remain unresolved. A referral for a broader review. And, in certain circumstances, personal exposure for corporate directors.

On that last point, be accurate about it: director liability is not automatic. It does not attach simply because an examination has started. It arises in specific circumstances set out in legislation, and whether it applies depends on the facts of the file.

One thing the CRA is direct about: amounts on a statement of account following an examination are treated as past due and payable immediately, because they relate to trust funds that were not remitted when they should have been. If the corporation cannot pay in full, a payment arrangement is the route to discuss.

Immediate steps

What Should You Do Now?

The first few days set the tone for the whole examination. These are the things that consistently help, and the things that consistently make files worse.

Do

  • Read the entire CRA communication, not just the first paragraph
  • Confirm the officer's identity before giving any information
  • Write down every deadline the moment you learn it
  • Identify exactly which accounts and periods are involved
  • Preserve all relevant records, including drafts and working papers
  • Reconcile your returns to your accounting records before submitting
  • Bring in a professional early, while the scope is still narrow
  • Keep a copy of every document you supply and the date you sent it
  • Respond accurately and on time, and ask for more time if you need it

×Do not

  • Ignore the contact and hope it goes away
  • Guess at an answer during a call with the officer
  • Alter or recreate records without a clear explanation of what you did
  • Send disorganised records without reviewing them first
  • Volunteer information or documents outside the scope of the request
  • Assume that hiring a representative removes your own obligations
  • Promise a payment amount before you understand the exposure
  • Send sensitive payroll files through ordinary unencrypted email
If there is a date on your letter, that date is the priority. Tell us what it says and we will explain what it is counting and what has to happen before it. Request a consultation.
Why Brookside
Parm Shergill, CPA, founder of Brookside CPA Inc. and former Canada Revenue Agency GST/HST auditor

A former CRA auditor on your side of the table

Parm Shergill, CPA · Founder and Principal

Parm spent more than ten years at the Canada Revenue Agency as a GST/HST auditor before founding Brookside CPA. He knows how these files get selected, what an examination officer is testing, and which answers close a file rather than widen it.

You deal with him directly. No handoff to a junior, and no explaining your business twice.

  • We read the request the way the CRA wrote itYou send what was actually asked for, and nothing that widens the scope.
  • We reconcile before you submitPayroll to T4s to remittances, and GST/HST returns to the ledger, so you know what the officer will find.
  • The CRA deals with usOnce authorised, we take the correspondence, the deadlines and the follow-up requests off your desk.
  • We fix what caused itRemittance controls, payroll process and a recurring GST/HST reconciliation, so the next period is clean.
Questions

Frequently Asked Questions

It is a CRA review of funds your business holds in trust for the government, meaning payroll deductions withheld from employees and GST/HST collected from customers. The CRA checks that your information returns are correct and complete and that you met your withholding, remitting and reporting obligations. It covers payroll, GST/HST, or both, and it also considers whether workers have been properly characterised as employees or self-employed.
No. The CRA states that the focus of an examination differs from a tax audit because it relates only to your payroll and GST/HST reporting obligations, whereas an audit is a broader review of your books and records. That said, an examination is not automatically minor. If it raises concerns, your business can be referred for an audit, and an examination can still result in assessments, penalties and interest.
Selection does not mean the CRA has concluded anything. The CRA lists factors that may lead to a review, including late or missed payroll remittances, T4, T4A or GST/HST returns filed late or not at all, an unanswered PD4R discrepancy notice, a CPP/EI ruling that changes your obligations, an employee disputing what they were paid, a shareholder changing how income was reported, a request from ESDC, or the business ceasing operations. Routine compliance activity also accounts for some examinations.
It depends on the accounts, periods and issues being examined. Commonly requested items include the salary and wage journal, T4 and T4A slips and summaries, remittance records, taxable benefit calculations, worker contracts and payment records, TD1 forms, GST/HST returns for outstanding periods, and sales and purchase invoices. General records such as the general ledger, bank statements and financial statements are also frequently requested. Follow the specific request rather than sending everything.
The CRA states the full process is generally completed within 60 days. Within that, you usually have up to 15 days to prepare, the examination itself generally takes place within 30 days, and results are given the same day if in person or within 15 days if sent by mail. Individual files take longer where records are incomplete, the business is complex, or the officer needs to consult elsewhere in the CRA.
Yes. Both are trust amounts, so a single examination can cover your payroll program account, your GST/HST account, or both at once. In practice the two often connect: subcontractor payments that raise a worker classification question on the payroll side frequently raise input tax credit questions on the GST/HST side as well.
The officer discusses the results with you and issues a statement of account: PD83-1 for payroll, GST501 for GST/HST. Where income or benefits were not reported correctly you receive amended or additional T4 or T4A slips, which you must then send to the workers concerned. Where CPP or EI was not deducted properly you receive a PD86 Statement of Discrepancies. If an assessment is required, a notice of assessment follows separately with the balance, penalties and interest.
In certain circumstances, yes, but it is not automatic and it does not follow simply because an examination has begun. Director liability for unremitted source deductions and GST/HST arises in specific situations set out in legislation, and whether it applies depends on the facts, including what the director did to prevent the failure. If you are a director and there are unremitted trust amounts, this is worth specific advice early rather than late.
Yes, once you have authorised them on the account. The CRA may still contact you directly, because the business remains responsible for meeting its obligations regardless of who prepared the returns. Note also that if the CRA writes to an authorised representative asking for information, the representative must respond by the date in the letter.
No. The scope of the examination is set by the issues the CRA identified, and you are legally required to provide the documents requested. Sending unrequested material can raise questions outside the original scope and lengthen the process. Equally, do not withhold records that were properly requested. The right approach is a complete, organised response to what was actually asked.
Yes. The CRA states that if the examination raises concerns, the business can be referred for an audit, which is a more detailed examination of all your books and records. This is one reason a well-organised, accurate response at the examination stage matters. Nobody can promise a referral will not happen, but a file that reconciles cleanly gives the officer less reason to escalate.
Verify the officer's identity before providing anything. Write down the program account number, the purpose of the examination, the periods under review and every deadline given. Preserve your records as they are. Then start reconciling payroll to your T4 return and remittances, and GST/HST returns to your ledger, so you know what the officer will find before they do. If the numbers do not reconcile, get help at that point rather than after you submit.

Tell us what the letter says. We will tell you what it covers.

Payroll, GST/HST, or both. We will identify the accounts and periods, confirm the deadlines, and set out what has to be reconciled before you respond.